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<title>A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain</title>
<creator>Kerry, Philip S.</creator>
<creator>Ayllón Barasoain, Juan</creator>
<creator>Taylor, Margaret A.</creator>
<creator>Hass, Claudia</creator>
<creator>Lewis, Andrew</creator>
<creator>García Sastre, Adolfo</creator>
<creator>Randall, Richard E.</creator>
<creator>Hale, Benjamin G.</creator>
<creator>Russell, Rupert J.</creator>
<description>Influenza A virus NS1 protein is a multifunctional virulence factor consisting of an RNA binding domain (RBD), a short linker, an effector domain (ED), and a C-terminal ‘tail’. Although poorly understood, NS1 multimerization may autoregulate its actions. While RBD dimerization seems functionally conserved, two possible apo ED dimers have been proposed (helix-helix and strand-strand). Here, we analyze all available RBD, ED, and full-length NS1 structures, including four novel crystal structures obtained using EDs from divergent human and avian viruses, as well as two forms of a monomeric ED mutant. The data reveal the helix-helix interface as the only strictly conserved ED homodimeric contact. Furthermore, a mutant NS1 unable to form the helix-helix dimer is compromised in its ability to bind dsRNA efficiently, implying that ED multimerization influences RBD activity. Our bioinformatical work also suggests that the helix-helix interface is variable and transient, thereby allowing two ED monomers to twist relative to one another and possibly separate. In this regard, we found a mAb that recognizes NS1 via a residue completely buried within the ED helix-helix interface, and which may help highlight potential different conformational populations of NS1 (putatively termed ‘helix-closed’ and ‘helix-open’) in virus-infected cells. ‘Helix-closed’ conformations appear to enhance dsRNA binding, and ‘helix-open’ conformations allow otherwise inaccessible interactions with host factors. Our data support a new model of NS1 regulation in which the RBD remains dimeric throughout infection, while the ED switches between several quaternary states in order to expand its functional space. Such a concept may be applicable to other small multifunctional proteins.</description>
<date>2023-11-13</date>
<date>2023-11-13</date>
<date>2011</date>
<type>info:eu-repo/semantics/article</type>
<identifier>http://hdl.handle.net/10259/7997</identifier>
<identifier>10.1371/journal.pone.0017946</identifier>
<identifier>1932-6203</identifier>
<language>eng</language>
<relation>PLoS ONE. 2011, V. 6, n. 3, e17946</relation>
<relation>https://doi.org/10.1371/journal.pone.0017946</relation>
<rights>http://creativecommons.org/licenses/by/4.0/</rights>
<rights>info:eu-repo/semantics/openAccess</rights>
<rights>Atribución 4.0 Internacional</rights>
<publisher>Public Library of Science</publisher>
</thesis></metadata></record></GetRecord></OAI-PMH>